Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRPLVAGNWKMHGTHSSVAELIKGLRQLALPSGVDVAVMPPCLFISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGKTLEVVARQLGSVIDELGVGAFARAVVAYEPVWAIGTGLTASPAQAQEVHAAIRAQLAAEN--AEVAKGVRLLYGGSVKAASAAELFGMPDIDGGLVGGASLNADEFGAICRAAGS
2Y63 Chain:A ((6-249))
--QPIAAANWKCNGTTASIEKLVQVFNEHTISHDVQCVVAPTFVHIPLVQAKLRNPKYVISAQNAIAK--SGAFTGEVSMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAWNQVVLAYEPVWAIGTGKVATPEQAQEVHLLLR-KWVSENIGTDVAAKLRILYGGSVNAANAATLYAKPDINGFLVGGASLKP-EFRDIIDA---
General information:
TITO was launched using:
RESULT:
Template:
2Y63.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156041 for 2045 contacts (-76.3/contact) +
2D Compatibility (PS) -26362 + (NN) -9739 + (LL) 388
1D Compatibility (HY) -20000 + (ID) 5300
Total energy: -217054.0 ( -106.14 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_2Y63.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Y63-query.scw
PDB file :
Tito_Scwrl_2Y63.pdb
: