Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLVTAIIKPFKLDDVRESLSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIDVAIADDQLDRVIEAITKAANTGKIGDGKIFVVNLEQAIRIRTGETDTDAI
3TA1 Chain:E ((1-108))
MKMVVAVIRPEKLECVKKALEERGFVGMTVTEVKGRGEQKGIR------EVEVDLLQKTKVEVVVSDDAVDEVVEAIVSSARTGKFGDGRIFVIPVEKSVKIRTGDEE----
General information:
TITO was launched using:
RESULT:
Template:
3TA1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51205 for 647 contacts (-79.1/contact) +
2D Compatibility (PS) -11215 + (NN) -1764 + (LL) 768
1D Compatibility (HY) -10400 + (ID) 2650
Total energy: -76466.0 ( -118.19 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_3TA1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TA1-query.scw
PDB file :
Tito_Scwrl_3TA1.pdb
: