Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSERGLLIVFSGPSGVGKGTVRQEIFSTPDHKFDYSVSMTTRPQRPGEVDGVDYFFRTREEFEALIKEGQMLEYAEYVGNYYGTPLSYVNETLDKGIDVFLEIEVQGALQVKSKVP--DGVFIFLTPPDLEELEERLVGRGTDSPEVIAQRIERAKEEIAL--MREYDYAVVNDQVSLAAERVKRVIEAEHYRVDRVIGRYTNMVKETDKKLS
1Z6G Chain:A ((22-211))
---NIYPLVICGPSGVGKGTLIKKLLNEFPNYFYFSVSCTTRKKREKEKEGVDYYFIDKTIFEDKLKNEDFLEYDNYANNFYGTLKSEYDKAKEQNKICLFEMNINGVKQLKKSTHIKNALYIFIKPPSTDVLLSRLLTRNTENQEQIQKRMEQLNIELHEANLLNFNLSIINDDLTLTYQQLKNYLLNSYIHL-------------------
General information:
TITO was launched using:
RESULT:
Template:
1Z6G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51095 for 1363 contacts (-37.5/contact) +
2D Compatibility (PS) -20919 + (NN) -14378 + (LL) 1736
1D Compatibility (HY) -16000 + (ID) 2900
Total energy: -103556.0 ( -75.98 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_1Z6G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z6G-query.scw
PDB file :
Tito_Scwrl_1Z6G.pdb
: