Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDIKIMALGGVRENGKNLYVVEVNDSIFVLDAGLKYPENEQLGVDVVIPNLDYLIENKKRVQGIFLTHGHADAIGALPYIIAEV-KAPVFGSPLTIELAKLFVKNST---------AVK-------KFNNFHVIDSETEIEF-QDAVISFFKTTHSIPESMGIVIGT--KEGNIVYTGDFKFDQAARKYYQTDLARLAEIGRDGVLALLSDSANATSNDQVAS----EYEVGDEIKSVIEDAEGRVIVAAVASNLIRIQQVFDAAAENGRR-------VVLTGFDIENIVRTAIR-MKRIHIA--------DENMI-------IK-PKDMTR--YEDNELLILETGRMGEPINGLQKMAIGRHRYVQIKDGDLVFIVTTPSIAKEAVV-ARVENLIYKA----G---GSVKLITQNL-RVSGHANGRELQLLMNLLK--PKYLFPIQGEYRDLSAHAGLAQE-VGMSADDIYIVKRGDIMVLEKDGFFHSGFVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVVITVSKKEKKIISKARVNTRGFVYVKKSRDILRESAELVNTTVEDYLSKDTFDWGELKGKVRDEVSKFLFDQTKRRPAILPVVMEVR |
| 2YCB Chain:A ((178-636)) | -DWARLTAMGGFREVGRSCLYLQTPNSRVLLDCGVNVAGGDD---KNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYHYGYDGPVYCTAPTRDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNAGH-ILGSAMAHLHIGDGQHNMVYTGDFKYEQSRLLE------AAANR-FPRIETLVMESTYGGHEDVQPSRNRAEKELVKTIYSTLRR-GGKILIPVFA--VGRAQELMIVLEEYIRTGIIDEVPVYIDGMIWEA-NAIHTARPEYLSKDLRDQIFHMGHNPFISDIFHKVNGMDERREIVEGEPSIILSTSGMLT-GGNSL-----EYFKWLCEDPDNSLVFVGYQAEGSLGRRIQKGWKEIPLKDEDDKMRVYNVRMNIKTIEGFSGHSDRRQLMEYVKRISPKPEKILLCHGDNYKTLDLASSIYRTYR---IETKTPLNLETVRIQ----------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166866 for 3458 contacts (-48.3/contact) +
2D Compatibility (PS) -41864 + (NN) -6289 + (LL) 11164
1D Compatibility (HY) -10400 + (ID) 3600
Total energy: -217855.0 ( -63.00 by residue)
QMean score : 0.362
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