Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVFKDATAMAQAIKQHKVSSQELVEQAIYKIEEQNVSVNAVVSKQYNEARQAAKYANASNAPFAGVPILLKDLGQNQKGQLSTSGSQLFKHYYAKQTDYLVQSFEKLGFIILGRTNTPEFGFKNISDSQLHGNVNLPFDHSRNAGGSSGGAAAAVSSGMVPIAGASDGGGSIRIPASFNGLIGLKPSRGRIPVGPSSYRGWQ----GASSHFALTKSVRDTKRLLYYLQSYQVE--SPFPLKKLSKESLFE--FSVSKPLKIAVLMDSPLKTKVSSEAKAAIKEAADFLSQKGNHLELVEQPLDGIHSMKTYCMMNSVETAAM-FDGIEKS-----LG---------RSME------FSDMELMTWAMYQSGQRVLAKDYSKLLDSWDQFAATMARFHE--NYDLILTAATNQPAPFHGQFDLDETLQKQLRHMREFSVSEQQDLIWKMFEDSMAWTPFTHQPNLTGQPSLAIPTHLT-----------------------------KEGLPLGVQLTAAKGREDLLLAVAELFEKEKQFKGPVCH |
| 3PPM Chain:A ((69-572)) | -LTLPLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTD-CETQLSQ-APRQGLLYGVPVSLKECFS-YKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLK-GCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPP-L---PFREEVYRSSRPLRVGYYETDNY-TMPSPAMRRALIETKQRLEAAGHTLIPFLPNNIPYALEVLSTGGLFSDGGRSFLQNFKGDFVDPCLGDLILILRLPSWFKRLLSLLLKPLFPRLAAFLNNMRPRSAEKLWKLQHEIEMYRQSVIAQWKAMNLDVLLTPMLG-PALDLNTPGR-----------------------------ATGAVSYTMLYNCLDFPAGVVPVTTVTAEDDAQMELYKGYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVEQLMTPQKQP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67515 for 4231 contacts (-16.0/contact) +
2D Compatibility (PS) -48139 + (NN) -25170 + (LL) 3752
1D Compatibility (HY) -9200 + (ID) 4850
Total energy: -151122.0 ( -35.72 by residue)
QMean score : 0.430
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