Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQMPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV
1R1P Chain:A ((6-100))
------------------------------------------------------IEFPEWFHEGLSRHQAENLL-MGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKFPSLNKLVDYYRTTSISKQKQVFLRD-------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1R1P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47736 for 618 contacts (-77.2/contact) +
2D Compatibility (PS) -10486 + (NN) -6823 + (LL) 6208
1D Compatibility (HY) -10000 + (ID) 2550
Total energy: -71387.0 ( -115.51 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_1R1P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R1P-query.scw
PDB file :
Tito_Scwrl_1R1P.pdb
: