Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAA-RTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPGCMSCKCVLS
3Q72 Chain:A ((1-166))
-SVYKVLLLGAPGVGKSALARIFGGV-----------HTYDRSIVVDGEEASLMVYDIW---------------GDAYVIVYSVTDKGSFEKASELRVQLRRAR---DVPIILVGNKSDLVRSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQIRLRR----------------------
General information:
TITO was launched using:
RESULT:
Template:
3Q72.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101327 for 1116 contacts (-90.8/contact) +
2D Compatibility (PS) -15337 + (NN) -4364 + (LL) 2252
1D Compatibility (HY) -13200 + (ID) 2500
Total energy: -134476.0 ( -120.50 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_3Q72.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q72-query.scw
PDB file :
Tito_Scwrl_3Q72.pdb
: