Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWGLKVLLLPVVSFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPT-GKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIANLASFPKM |
| 1S4V Chain:A ((1-219)) | -----------------------------------------------------------------------------------------------------------------TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVAN-QPVSVAIDAGGSDFQFYSEGVFTG-SCGT-ELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S4V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77705 for 1863 contacts (-41.7/contact) +
2D Compatibility (PS) -23125 + (NN) -11171 + (LL) 8940
1D Compatibility (HY) -16000 + (ID) 5450
Total energy: -124511.0 ( -66.83 by residue)
QMean score : 0.528
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