Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASHLVLYTGAKMPILGLGTWKSPPG--KVTEAVKVAIDLGYRHIDCAHVYQNENEVGLGLQEKLQGQVVKREDLFIVSKLWCTDHEKNLVKGACQTTLRDLKLDYLDLYLIHWPTGFKPG--------KDPFPLDGDGNVVP-DESDFVETWEAMEEL---VDEGLVKAIGVSNFNHLQVEKILNKPGLKYKPAVNQIEVHPYLTQEKLIEYCKSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKYNKTTAQVLIRFPMQRNLIVIPKSVTPERIAENFQVFDFELSPEDMNTLLSY-NRN-WRVCALMSCASHKDYPFHEEY |
| 4IJR Chain:A ((23-335)) | --IYFSLNNGVRIPALGLGTANPHEKLAETKQAVKAAIKAGYRHIDTAWAYETEPFVGEAIKELLEDGSIKREDLFITTKVWPVLW--DEVDRSLNESLKALGLEYVDLLLQHWPLCFEKIKDPKGISGLVKTPVDDSGKTMYAADGDYLETYKQLEKIYLDPNDHRVRAIGVSNFSIEYLERLIKECR--VKPTVNQVETHPHLPQMELRKFCFMHDILLTAYSPLGSHGA-------P-NLKIPLVKKLAEKYNVTGNDLLISYHIRQGTIVIPRSLNPVRISSSIEFA--SLTKDELQELNDFGEKYPVRFIDEPFAAILPEFTGN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IJR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196013 for 2511 contacts (-78.1/contact) +
2D Compatibility (PS) -32353 + (NN) -18120 + (LL) 1200
1D Compatibility (HY) -20000 + (ID) 5350
Total energy: -270636.0 ( -107.78 by residue)
QMean score : 0.697
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