Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASHLELNNGTKMPTLGLGTWKSPPG--QVTEAVKVAIDMGYRHIDCAQVYQNEKEVGVALQEKLKEQVVKRQDLFIVSKLWCTFHDQSMVKGACQKTLSDLQLDYLDLYLIHWPTGFKPG--------PDYFPLDASGNVIP-SDTDFVDTWTAMEQL---VDEGLVKAIGVSNFNPLQIERILNKPGLKYKPAVNQIECHPYLTQEKLIEYCHCKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKEIAAKYNKTTAQVLIRFPIQRNLVVIPKSVTPARIAENFKVFDFELSNEDMATLLSY-NRN-WRVCALMSCAKHKDYPFHAEV |
4IJR Chain:A ((23-335)) | --IYFSLNNGVRIPALGLGTANPHEKLAETKQAVKAAIKAGYRHIDTAWAYETEPFVGEAIKELLEDGSIKREDLFITTKVWPVLW--DEVDRSLNESLKALGLEYVDLLLQHWPLCFEKIKDPKGISGLVKTPVDDSGKTMYAADGDYLETYKQLEKIYLDPNDHRVRAIGVSNFSIEYLERLIKECR--VKPTVNQVETHPHLPQMELRKFCFMHDILLTAYSPLGSHGA-------P-NLKIPLVKKLAEKYNVTGNDLLISYHIRQGTIVIPRSLNPVRISSSIEFA--SLTKDELQELNDFGEKYPVRFIDEPFAAILPEFTGN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IJR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202019 for 2511 contacts (-80.5/contact) +
2D Compatibility (PS) -32017 + (NN) -16262 + (LL) 1216
1D Compatibility (HY) -21600 + (ID) 5550
Total energy: -276232.0 ( -110.01 by residue)
QMean score : 0.686
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