Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSRTGPKMEGSGGRVRLKAHYGGDIFITSVDAATTFEELCEEVRDMCRLHQQHPLTLKWVDSEGDPCTVSSQMELEEAFRLARQCRDEGLIIHVFPSTPEQPGLPCPGEDKSIYRRGARRWRKLYRANGHLFQAKRFNRRAYCGQCSERIWGLARQGYRCINCKLLVHKRCHGLVPLTCRKHMDSVMPSQEPPVDDKNEDADLPSEETDGIAYISSSRKHDSIKDDSEDLKPVIDGMDGIKISQGLGLQDFDLIRVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTT-STFCGTPNYIAPEILRGEE----YGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPR--FLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEKKQALPPFQPQITDDYGLDNF-DTQFTSEPVQLTPDDEDAIKRIDQSEFEGFEYINPLLLSTEESV |
| 2F2U Chain:B ((46-400)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALRKNKNIDNFLNRYEKIVKKIRGLQMKA----EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS-PWVVQLFCAFQDDKYLYMVMEYMPGGDLV-NLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA-----DSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFLT-DREVRLG---RNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDDI--------TFPIPKAFVG--NQLPFIGFTY------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2F2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -168570 for 2628 contacts (-64.1/contact) +
2D Compatibility (PS) -36089 + (NN) -19977 + (LL) 13968
1D Compatibility (HY) -30000 + (ID) 5900
Total energy: -246568.0 ( -93.82 by residue)
QMean score : 0.483
|
|
|