Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAVFDLDLETEEGSEGEGEPELSPADACPLAELRAAGLEPVGHYEEVELTETSVNVGPERIGPHCFELLRVLGKGGYGKVFQVRKVQGTNLGKIYAMKVLRKAKIVRNAKDTAHTRAERNILESVKHPFIVELAYAFQTGGKLYLILECLSGGELFTHLER-EGIFLEDTACFYLAEITLALGHLHSQGIIYRDLKPENIMLSSQGHIKLTDFGLCKESIHEGAVTHTF-CGTIEYMAPEILVR-----SGHNRAVDWWSLGALMYDMLTGSPPFTAENRKKTMDKIIRGK--LALPPY---LTPDARDLVKKFLKRNPSQRIGGGPGDAADVQRHPFFRHMNWDDLLAWRVDPPFRPCLQSEEDVSQF--DTRFTRQTPVDSPDDTALSESANQAFLGFTYVAPSVLDSIKEGFSFQPKLRSPRRLNSSPRAPVSPLKFSPFEGFRPSPSLPEPTELPLPPLLPPPPPSTTAPLPIRPPSGTKKSKRGRGRPGR |
| 3QFV Chain:A ((66-410)) | --------------------------------------------------------VKEMQLHREDFEIIKVIGRGAFGEVAVVK---MKNTERIYAMKILNKWEMLKRA-ETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLIC-SRERRLG--QNGIEDFKKHAFFEGLNWENI--RNLEAPYIPDVSSPSDTSNFDV-------------------SGLHLPFIGFTFTTESCFSDRGSL--------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -179755 for 2494 contacts (-72.1/contact) +
2D Compatibility (PS) -33774 + (NN) -20658 + (LL) 5260
1D Compatibility (HY) -31200 + (ID) 5600
Total energy: -265727.0 ( -106.55 by residue)
QMean score : 0.462
|
|
|