Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
YCKESLHLCMQHLKLNDRPTWLKCCDRLIIPGPCMCKYIKDPVQWKEAYRLMASCGKTVPLNQSLKSYFKCG
M084 Chain:A ((1-125))
YCKESLHLCMQHLKLNDRPTWLKCCDRLIIPGPCMCKYIKDPVQWKEAYRLMASCGKTVPLNQSLKSYFKCG
General information:
TITO was launched using:
RESULT:
Template:
M084.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57419 for 583 contacts (-98.5/contact) +
2D Compatibility (PS) -7551 + (NN) -6257 + (LL) 0
1D Compatibility (HY) -12800 + (ID) 3600
Total energy: -87627.0 ( -150.30 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_M084.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M084-query.scw
PDB file :
Tito_Scwrl_M084.pdb
: