Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFLIVANWKMNGTRSLFVNFIGKLNDKSNEITSKLVICPPFTSLPG-NIEL-NSNISIGAQNCHYKKSGSYTGEISAEMLKELGCTYVILGHSERTH---ETNGEIKLKSETAIESGLHPIICVGENLEDRESSKTKEVVEYQC---KSRLPIHG--EYTVAYEPIWAIGTGHVPSNNAIAEVIEVIQSYTSKK---------HVIYGGSVSLENIENLSNILNLSGVLIGSASLDFDRFHKIVQQVEKAY |
| 4GNJ Chain:B ((28-267)) | ---IVAANWKCNGTTASIEKLVQVLNEHQIDHDVQCVVAPSFVHIPMVQAKLCNPKYAVSAENA-IAKSGAFTGEVSMPILKDLGVSWVILGHSERRTYYGETDGVVAQKVADAYNQGFMVIACIGETLQQREANQTAKVVLSQTAAIAAKLPKEAWSQIVLAYEPVWAIG--KVATPEQAQEVHALLRQWVSEKIGNGVATKLRILYGGSVTAGNAKTLYMKPDINGFLVGGASLK-PEFRDIIDATR--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GNJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -121303 for 1761 contacts (-68.9/contact) +
2D Compatibility (PS) -23628 + (NN) -7959 + (LL) 800
1D Compatibility (HY) -17200 + (ID) 4150
Total energy: -173440.0 ( -98.49 by residue)
QMean score : 0.483
|
|
|