Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLADKPVLSHAVKKLLTNQYIDYVRVIINRNHEDFYRETIDSLHNYYLSEAVHSFQYVTLKSRKKEEWIPVSSTGMKGRVDTKLLSPVYGGKSRQNSVKLGLESLQKINPDFVVIHDACRPFVSNTLINNLARSMINNQHTGVVPAIEVEDTISLVNDDLIESTIPRERLRAIQTPQIFNFKELLSYHRSNKEFTDDSSLMVEHKKRVVVTRGEKINFKLTTKEDINMAKLLLDEPKYRVGTGYDIHRFIKAQGKAKSFIKICGVEIEYDMKIEAHSDGDVAIHAVVDAILGALGCGDIGAHFPPSFPEWKDRNSSHFLDFAAKKAKEKGYSVSNLDITIVCEEPKISPYKVAMKKFISKTLEIDSEFVNVKATTTEKLGSIGRNEGILAHASVLLYKIAPLHN
3JVH Chain:B ((24-179))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FRIGQGYDVHQLVPGR-----PLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHF---------ADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR------


General information:
TITO was launched using:
RESULT:

Template: 3JVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136025 for 1260 contacts (-108.0/contact) +
2D Compatibility (PS) -16316 + (NN) -9560 + (LL) 17248
1D Compatibility (HY) -10400 + (ID) 3050
Total energy: -158103.0 ( -125.48 by residue)
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_3JVH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JVH-query.scw
PDB file : Tito_Scwrl_3JVH.pdb: