Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLSKYKNQSVAVFGLGKTGLSVINVLIKSGAKAYAWDDSKEQMANAKTMYKECNFIHPKKYDWHEIKALILSPGVPISYPKPHWIVKLARSFDCKIKSDIELFLEAKAKNQKIVGVTGTNGKSTTTSLIGHILKSAGKKVAIGGNLGVPILDLEKDAEIYVIEISSFQLELINMPAVIPVHDHTFFSGSQYRAAWMIKRVSEMTKKMTEVTKRMAGMIKVDISVLLNITLDHIDRHGSMENYIAVKSKLIGGSKVAVIGCDNEITADIFNKFTGNKIPISGVRSLLDDKKGAEIQEISLKLENHNLSASDAKINLTSNAENIAASCAVCKLLKVDSSTIIDGIKSFSGLKHRNELLGKIENVLFVNDSKATNAESSKKAILSYKN----IYWIVG----GRSKEGGIESLSKHFAR-IRKALLIGESTEVFASTMENKVDYVRCCNLEDAFRLAFEEAIKSKEKTTILLSPACASFDQWRNFEERGEAFCRMFEKLRDSFTITRVV |
| 4UAG Chain:A ((300-437)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLH-VDGTLHLLLGGDGK----SADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTE--TMEQAMRLLAPRV---QPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 33718 for 1058 contacts (31.9/contact) +
2D Compatibility (PS) -13245 + (NN) 3123 + (LL) 25048
1D Compatibility (HY) 8000 + (ID) 200
Total energy: 56444.0 ( 53.35 by residue)
QMean score : ?
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