Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKIAIVGLPNAGKSTLFNRILGRKAAVVSNIPGITRDRQEGVGRISDLELKIIDTGGWNDQTNFFLQIV-EQIEFS-LFSADIIFFLVDAKV-QNEQNKEFAKWLKRRTNKSVILIANKCESYKSENIDYLQFFDFIG---PVYISAEHNLGMVD-LYNALAGVIDSSTNFSSVIPKPLPVIKVAGTGIQEKNEQISTLHAENQSNQPNRLRVAIIGRPNVGKSTFLNSLLSENRLITSSEPGTTRDSVDITYNHNGKLITLIDTAGIRRRANLIDNLELKFVKKSMESIKRSHVVVLMLDSLLGIKQQDLS-IGE-AAIKGGKGIIIVLNKWDLINKDDRSRLIKFVRQQEITRLFLEVPTVTISALKGIRCSD-VID-KCLEVNEFLNKKISTAKVNKWLVDALGRHPHPFVKGRAIRMKYIAQIGTKPPAFSLTCNVPEGVDESYKRYLTNDLRKNFF-IDGIPVRLLLKKNKNPYVK |
| 1MKY Chain:A ((2-439)) | -ATVLIVGRPNVGKSTLFNKLVKDPVQDTVEWYG--------------KTFKLVDTCGVFDNPQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLADFLRKS-TVDTILVANKAENLREFEREVKPELYSLGFGEPIPVSAEHNINLDTMLETIIKKLEEKGLD------------------------------LESKPEITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPVDDEVFI------DGRKYVFVDTAGLEKYSN----------YRVVDSIEKADVVVIVLDATQGITRQDQRMAGLME--RRGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRMIDAMN--LAYASYTTKVPSSAINSALQKVLAFTNLP----RGLKIFFGVQVDIKPPTFLFFVNSIEKVKNPQKIFLRKLIRDYVFPFEGSPIFLKFKRSR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156387 for 3133 contacts (-49.9/contact) +
2D Compatibility (PS) -43568 + (NN) -18277 + (LL) 5020
1D Compatibility (HY) -21200 + (ID) 5550
Total energy: -239962.0 ( -76.59 by residue)
QMean score : 0.486
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