Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRGDFAFKIIKQSNSARAGTIKTPSGNIETPAFIFCATRAAIKAADIERISEAGTQIILSNTYHLMLQPGENTVAKLGGLRKMMGWNGPMLTDSGGYQIFSLGHGSVSEEIKGIRKKQKTLIKIDEDGAIFRSYINGKAYCLTPERSIQIQQKLGADLILVLDECTPFHVSKEYTRRSMLMSHKWAERSLNEFG--KDDNGKQALYGISQGGVYRDLRRESCYFINNLPFFGQAIGG-SLGRSKEQMYDVVSFTMEHLKKDRPTHLLGIGRIVDIFYAVEAGIDTFDCVHPTRLARHGGALIKVKNRNTISSRYKEHINLRNQQFELDGNPIEGDCLCFTCRKYSRAYIHHLLKTKELLAYTLITIHNVFFMNKLMKSIRQAILDDRLDQEKSNWVGEV |
| 3BLD Chain:A ((11-372)) | -RPRFSFSIAAREGKARTGTIEMKRGVIRTPAFMPVGTAATVKALKPETVRATGADIILGNTYHLMLRPGAERIAKLGGLHSFMGWDRPILTDSGGFQVMS----------------------QSEEGVTFKS--------LSPERSIEIQHLLGSDIVMAFDECTPYPATPSRAASSMERSMRWAKRSRDAFDSRKEQAENAALFGIQQGSVFENLRQQSADALAEIGFDGYAVGGLAGGEGQDEMFRVLDFSVPMLPDDKPHYLMGVGKPDDIVGAVERGIDMFD----------GQAFT-----------WDGPINIRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMTEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BLD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177532 for 2921 contacts (-60.8/contact) +
2D Compatibility (PS) -35718 + (NN) -12138 + (LL) 3364
1D Compatibility (HY) -26400 + (ID) 7500
Total energy: -255924.0 ( -87.62 by residue)
QMean score : 0.504
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