Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIFLDSVDLNEIEELKEF--IDGITTNPSLIAKSGRKDK-YEGLISEICSIVTGPVSVEVVASNHEDMVKEGLKLTKIASNIVVKLPLTYEGLISCKKLWTEHKIPANITLCFSPGQALLAAKAGACFISPFVGRLDDISYDGLLLIEDICTIYSNYGFDTKILVASVRSPTHVIEAARLGANSITVPAKVLRQLLNHPLTDRGLAIFEKDWSTKQ
3S1X Chain:A ((1-215))
MKIFLDTANIDEIRTGVNWGIVDGVTTNPTLISKEAVNGKKYGDIIREILKIVDGPVSVEVVSTKYEGMVEEARKIHGLGDNAVVKIPMTEDGLRAIKTL-SSEHINTNCTLVFNPIQALLAAKAGVTYVSPFVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILVASIRNPIHVLRSAVIGADVVTVPFNVLKSLMKHPKTDEGLAKFLEDWKKVS
General information:
TITO was launched using:
RESULT:
Template:
3S1X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146872 for 1732 contacts (-84.8/contact) +
2D Compatibility (PS) -22985 + (NN) -3525 + (LL) 156
1D Compatibility (HY) -23200 + (ID) 5400
Total energy: -201826.0 ( -116.53 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_3S1X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S1X-query.scw
PDB file :
Tito_Scwrl_3S1X.pdb
: