Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIERTLSILKPDTVKNNIIGNINSYIEKSGLRIIAQKMMLLTKKQAELFYAIHKDRPFFGGLVEFMTSGPVIVQVLVGENAISKYRQIMGATDPKQADKGTIRGDFADDVNE---NRVHGSDSLENAHKEIAFFFAECELV
2DXF Chain:A ((8-145))
---ERTLVIIKPDAVVRGLIGEIISRFEKKGLKIVGMKMIWIDRELAEKHYEEHREKPFFKALIDYITKTPVVVMVLEGRYAVEVVRKMAGATDPKDAAPGTIRGDFGLEVSDAICNVIHASDSKESAEREISLFFKPEELF
General information:
TITO was launched using:
RESULT:
Template:
2DXF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59920 for 1027 contacts (-58.3/contact) +
2D Compatibility (PS) -14460 + (NN) -2478 + (LL) 556
1D Compatibility (HY) -12400 + (ID) 3250
Total energy: -91952.0 ( -89.53 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_2DXF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DXF-query.scw
PDB file :
Tito_Scwrl_2DXF.pdb
: