Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFFFATSCLVLTLVVVSSLSSSANASQTDNGVNRSGSEDPTVYSATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENANKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQLLRKSEAQAKKEKLNIWSEDNADSGQ
4IUN Chain:A ((1-136))
-------------------------------------------------------------------------------ATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPEFN------EKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKGNNTHEQLLEKAEAQAKKEKLNIWSE-------
General information:
TITO was launched using:
RESULT:
Template:
4IUN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47165 for 1064 contacts (-44.3/contact) +
2D Compatibility (PS) -14426 + (NN) -2124 + (LL) 5568
1D Compatibility (HY) -16000 + (ID) 6500
Total energy: -80647.0 ( -75.80 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_4IUN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IUN-query.scw
PDB file :
Tito_Scwrl_4IUN.pdb
: