Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIVKVTDADFDSKV--ESGVQLVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL
2I4A Chain:A ((7-99))
-----VSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLVRDGKVIDKKVGALPKSQL--------
General information:
TITO was launched using:
RESULT:
Template:
2I4A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53621 for 608 contacts (-88.2/contact) +
2D Compatibility (PS) -9665 + (NN) -3457 + (LL) 1636
1D Compatibility (HY) -9600 + (ID) 2350
Total energy: -77057.0 ( -126.74 by residue)
QMean score : 0.669
(partial model without unconserved sides chains):
PDB file :
Tito_2I4A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I4A-query.scw
PDB file :
Tito_Scwrl_2I4A.pdb
: