Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTFIANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKTLTN-QDVYLEYDK-EKQDRYGRTLAYVWISKDRMYNKELVEKGLAREKY-FSPNGKYRNVFIEAQNKAKQQKLNIWSK
3NK9 Chain:A ((9-135))---------------------------------------------KEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPEF------NEKYGPEASAFTKKMVENAKKIEAEFDKGQRTDKYGRGLAYIY-ADGKMVNEALVRQGLAKVAYVYKGNNTHEQLLRKAEAQAKKEKLNIWS-


General information:
TITO was launched using:
RESULT:

Template: 3NK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3095 for 977 contacts (3.2/contact) +
2D Compatibility (PS) -13397 + (NN) -5186 + (LL) 3536
1D Compatibility (HY) -8800 + (ID) 2400
Total energy: -23152.0 ( -23.70 by residue)
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_3NK9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NK9-query.scw
PDB file : Tito_Scwrl_3NK9.pdb: