Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKDFFNRTKKKKYLTVQDSKNNDVPAGIMTKCPKCKKIMYTKELAENLNVCFNCDHHIALTAYKRIEAISDEGSFTEFDKGMTSANPLDFPSYLEKIEKDQQKTGLKEAVVTGTAQLDGMKFGVAVMDSRFRMGSMGSVIGEKICRIIDYCTENRLPFILFSASGGARM---QEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFA---SVGDINLSEPKALIGFAGRRVIEQTINEK------------------LPDDFQTAEFLLEHGQLDKVVHRNDMRQTLSEILKIHQEVTK |
1X0U Chain:A ((278-510)) | -----------------------------------------------VEQIVPN-DAAKPYNMREIIYKIVDNGEFLEVHKH------------------------WAQNIIVGFARIAGNVVGIVANNPEEFGGSIDIDAADKAARFIRFCDAFNIPLISLVDTPGYVPGTDQEYKGIIRHGAKMLYA---FAEATVPKITVIVRKSYGGAHIAMSIKSLGADLVYAWPTAEIAVTGPEGAVRILYRKEIQQASNPDDVLKQRIAEYRKLFANPYWAAEKGLVDDVIEPKDTRRVIVAGLEMLKTKR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1X0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102422 for 1766 contacts (-58.0/contact) +
2D Compatibility (PS) -22216 + (NN) -3459 + (LL) 4736
1D Compatibility (HY) -4800 + (ID) 2150
Total energy: -130311.0 ( -73.79 by residue)
QMean score : 0.498
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