Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFSNQYIQQRIHKANSLREEGKNPYKNGLKRSLTNAAFLEKYAYVKGLEEPKDKEKCESVVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEFKSLKKHLEVGDIVLVKGFPFATKTGELSIHALEFHILSKTIVPLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMMH-PIPGGANARPFITYH----NALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDM---EVDFNQ--TSVISYLDALETIGGISKGILEKEDRLLAYLLEQGIKVEPNLTHGKLLAEAFDHFVEHKL--INPTFVTEYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKE-KGDEEAQYMDEDYVWALAHEMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMRPVKNDFNVEGEE |
3A5Y Chain:A ((29-344)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------PSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAES-LSYQQAFLRYLEIDPLSAD-------------------------------------------TLLQLLFTFGVEPNIGKEKPTFVYHFPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLP-QHPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103570 for 2193 contacts (-47.2/contact) +
2D Compatibility (PS) -29870 + (NN) -8905 + (LL) 16152
1D Compatibility (HY) -18000 + (ID) 4750
Total energy: -148943.0 ( -67.92 by residue)
QMean score : 0.419
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