Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKMNAPDGVAVWVNEDRCKGCDICVSVCPAGVLGMGIEKERVLGK----VAKVAYPESCIGCVQCELHCPDFAIYVADRKDFKFAKVSKEAQERSEKVKANKYMLLEETILEGRGK
1IQZ Chain:A ((3-72))
----------YTIVDKETCIACGACGAAAPD-IYDYDEDGIAYVTLDDNQGIVEVPDILIDDMMDAFEGCPTDSIKVADEPFDGDPNKFE---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1IQZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54462 for 459 contacts (-118.7/contact) +
2D Compatibility (PS) -6657 + (NN) -304 + (LL) 2860
1D Compatibility (HY) -800 + (ID) 550
Total energy: -59913.0 ( -130.53 by residue)
QMean score : 0.320
(partial model without unconserved sides chains):
PDB file :
Tito_1IQZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IQZ-query.scw
PDB file :
Tito_Scwrl_1IQZ.pdb
: