Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKIGNVEIKNQVVVAPMAGISN-----SA----FRLTVK--EFGAGLVCCEMISDKGIAYR--N------AK---TLDML--YIDEKEKPLSLQIFGG-----------------------EK------------ETLVEAAKFVAENTTADIIDINMG---------CPVNKIIKCEAGAKWLLDPNKVYDMVAAVVDAVDKPVTVKMRIGWDE----EHVFAIENALAAERAGAAAVAMHGRTRVQ--MYEG-SANWDVLRDVKRELKIPFMANGDVRTPEDAKRILEHTGADGVMIGRAALGNPWMIYRTVKFLETGELLLEPEPREKMQTAMLHLNRLVELKGENIAVREFRQHAAYYLKGARGSTRAKVAANQATKQSEMEAILNEFVLQYEEKALAKQD |
| 3GR7 Chain:A ((8-326)) | PYTIRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVGLVKEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKE-AGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAARELGA-------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141787 for 1972 contacts (-71.9/contact) +
2D Compatibility (PS) -25736 + (NN) -5863 + (LL) 7764
1D Compatibility (HY) -6400 + (ID) 2550
Total energy: -174572.0 ( -88.53 by residue)
QMean score : 0.412
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