Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKEIIQTSSAPKALGPYSQAVKVNGLIFTSGQLGINPATGELVV-GATKQAEQAFKNLAAVLEEAGSGLDKIIKATVFFKDLNEFKAVNEVYATFFSSDFPARSAFQVAKLPLDAEIEIEVIAEA
2DYY Chain:A ((2-125))
--KEVIFTENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKDQTRQVLENIKAILEAAGYSLNDVIKVTVYLKD-NDFAKMNEVYAEYFGESKPARVAVEVSRLPKDVLIEIEAIAYK
General information:
TITO was launched using:
RESULT:
Template:
2DYY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41748 for 922 contacts (-45.3/contact) +
2D Compatibility (PS) -13500 + (NN) -6918 + (LL) 528
1D Compatibility (HY) -11600 + (ID) 3000
Total energy: -76238.0 ( -82.69 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_2DYY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DYY-query.scw
PDB file :
Tito_Scwrl_2DYY.pdb
: