Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNEALGLIEVTGFLGAVVAADTCLKAANVELIQCEVISGGLTTVELTGDVGAVNAAIEAGKAATEDLGCLVSSHVIARMSEDTKALFVPQEEAKPQPKEIKQEEPKEVIQKVVEVNTNTKSTEKKLRAMKVIDLRKLAYTLDNVPIPKSKIKYANKDKLVHALKDIYGRSEN
4RBU Chain:C ((10-97))
---EALGMVETKGLTAAIEAADAMVASANVMLVGYEKIGQGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKIL---------PKG-------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4RBU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51084 for 686 contacts (-74.5/contact) +
2D Compatibility (PS) -9495 + (NN) -3557 + (LL) 6172
1D Compatibility (HY) -6000 + (ID) 2000
Total energy: -65964.0 ( -96.16 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_4RBU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RBU-query.scw
PDB file :
Tito_Scwrl_4RBU.pdb
: