Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANANALGMIETKGLVGAVEAADAMVKAANVTLMGKEQVGG--GLVTVMVRGDVGAVKAATDAGAAAAERVGELLSVHVIPRPHSEVDAILPKSAE
4RBV Chain:D ((11-98))
-----ALGMVETKGLTAAIEAADAMVASANVMLVGYEKIGGSGGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILPK---
General information:
TITO was launched using:
RESULT:
Template:
4RBV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40301 for 658 contacts (-61.2/contact) +
2D Compatibility (PS) -9503 + (NN) -2381 + (LL) 556
1D Compatibility (HY) -9600 + (ID) 3250
Total energy: -64479.0 ( -97.99 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_4RBV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RBV-query.scw
PDB file :
Tito_Scwrl_4RBV.pdb
: