Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDLGKVITAMVTPIHPEKDKVCKKRIHHLVNHLIKNGSDGLVIAGTTGESPTLSHDEKIKLFRQVIETNDGRAKLIAGTGSNNTAETIAFTKEVATLGGMDAVLIVAPYYNKPNQDGLYAHFAAVAEASDLPVVIYNIPGRSVVNIEPETIIRLAKLPNIVGVKESSGNLDNISKIIAETSDDFQVYSGDDSLTLPILAVGGNGVISVASHIVGNEMQEMIQAFERGEVQKAAQIHRELLPLMNGLFSVPNPAPTKYLLNQQGISVGPVRLPLVDLNAEQGTKLQAILEGLSK
3RK8 Chain:B ((6-276))------IVAIVTPMLKDGG-VDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGA-DAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLAEIPNIVGIKDATGDVPRGKALIDALNGKMAVYSGDDETAWELMLLGADGNISVTANIAPKAMSEVCAVAIAKDEQQAKTLNNKIANLHNILFCESNPIPVKWALHEMGLIDTGIRLPLTPL-AEQ-------------


General information:
TITO was launched using:
RESULT:

Template: 3RK8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138718 for 2422 contacts (-57.3/contact) +
2D Compatibility (PS) -30279 + (NN) -22323 + (LL) 1492
1D Compatibility (HY) -20800 + (ID) 5450
Total energy: -216078.0 ( -89.21 by residue)
QMean score : 0.579

(partial model without unconserved sides chains):
PDB file : Tito_3RK8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RK8-query.scw
PDB file : Tito_Scwrl_3RK8.pdb: