Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLTKLKKVMISVIAATLLLLAGCGSSAVIKTDAGSVTQDELYEAMKTTYGNEVVQQLTFKKILEDKYTVTEKEVNAEYKKYEEQYGDSFESTLSSNNLTKTSFKENLEYNLLVQKATEANMDVSESKLKAYYKTWEPDITVRHILVDDE---------------------ATAKEIQTKLKNG-EKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALENKDDVSGIVKSTYGYHLIQLVKKTEKGTYAKEKANVKAAYIKSQLTSENMTAALKKELKAANIDIKDSDLKDAFADYTSTSSTSSTTTSN
3TC5 Chain:A ((56-166))---------------------------------------------------------------------------------------------------------------------------------------ARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCS-SAKARGDLGAFSRGQMQKPFEDASFALR-TGEMSGPVFTDSGIHIILRTE--------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3TC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34690 for 642 contacts (-54.0/contact) +
2D Compatibility (PS) -9848 + (NN) -6811 + (LL) 15008
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: -44091.0 ( -68.68 by residue)
QMean score : 0.683

(partial model without unconserved sides chains):
PDB file : Tito_3TC5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TC5-query.scw
PDB file : Tito_Scwrl_3TC5.pdb: