Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MSLTEMLQIKYPILQGAMAQIATYELASAVSNAGGLGIIASGGM-SADALREQIRLCKEKTTKPFAVNIMLMM----PNCPELVDVIIEEDVRVVTTGAGTPKPFMEKFKAAGIKVIAVIPSVKIAQKMEEIGVDAVVAEGTEAGGHVG--ETTTMALVRQVVSAVNIPVIAAGGIADGHGMAAVYALGASGVQIGTLFLVAEECPVPASFKQAVLDATDTSTTVTGRRNGAPVRSIKNPMIQKYVELENENASRDK--LEELTLGSLRKAVHEGDVENGSVMAGQICGMLTEIRSTSDIIENLMKESKQVASNLVIQ--- |
| 2GJL Chain:A ((3-326)) | VFRTRFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDPGEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPAVKAAIRAADERSTDLIMRSLRNTARVARNAISQEVLAIEARGGAGYADIAALVSGQRGRQVYQQGDTDLGIWSAGMVQGLIDDEPACAELLRDIVEQARQLVRQRLEGMLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GJL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242620 for 2784 contacts (-87.1/contact) +
2D Compatibility (PS) -33469 + (NN) -10843 + (LL) 0
1D Compatibility (HY) -14800 + (ID) 4800
Total energy: -306532.0 ( -110.10 by residue)
QMean score : 0.584
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