Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFFIDTANVEEIKKANRMGFISGVTTNPSLVAKEGRDFNEVIQEITSIVDGPISGEV---VSLEADEMIAEG-RVIAKIHPN------MVVKIPMTGEGLAAVKVLTEEGIKTNVTLVFSATQALLAARAGATYVSPFLGRLDDI--------------GDDGLVLIRDIADIFEIHGIPTEIISASVRHPIHVIECAKAGADIATVPFKVFEQMLKHPLTDSGIDKFLADWEAAKK
3TNO Chain:B ((111-284))
--------------------------------------------KILDVIEGKVSSEVDARVSFNSATTIDYAKRIIARYESNGIPKDRVLIKIAATWEGIKAAKLLQKEGINCNLTLIFDKAQAKACAEAGVYLVSPFVGRITDWQMQQNNLKTFPAIADDDGVNSVKAIYKLYKSHGFKTIVMGASFRNVEQVI--ALAGCDALTISPVLLEEL----------------------
General information:
TITO was launched using:
RESULT:
Template:
3TNO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97234 for 1153 contacts (-84.3/contact) +
2D Compatibility (PS) -16142 + (NN) -5034 + (LL) 4636
1D Compatibility (HY) -13200 + (ID) 2850
Total energy: -129824.0 ( -112.60 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_3TNO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TNO-query.scw
PDB file :
Tito_Scwrl_3TNO.pdb
: