Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKVRLYIARHGKTMFNTIGRAQGWSDTPLTTFGELGIKELGLGLKASNISFKEAFSSDSGRTLQTMEIILREVQQENIPYTRDKRIREWCFGSLDGGYDGDLFNGVLPRV-SNGDMSHLTH-----------E---EIANLICQVDTAGWAEPWAILSNRILSGFTAIAKKIEDIGGGNAIVVSHGMTIATFLWLIDHSTP---RSLGIDNGSVSVVDFEDGT-FSIQSIGDMSYREKGREILEKTLQ |
| 3KKK Chain:A ((2-231)) | -TTYTLVLLRHGESTWNKENKFTGWTDVPLSEKGEEEAIAAGKYLKEKNFKFDVVYTSVLKRAICTAWNVLKTADLLHVPVVKTWRLNERHCGSLQGLNKSETA-KKYGEEQVKIWRRSYDIPPPKLDKEDNRWPGHNVVYKNVPKDALPFTECLKDTVERVLPFWFDHIAPD-ILANKKVMVAAHGNSLRGLVKHLDNLSEADVLELNIPTGVPLVYELDENLKPIKHYYLL---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KKK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63684 for 1682 contacts (-37.9/contact) +
2D Compatibility (PS) -22082 + (NN) -4323 + (LL) 1700
1D Compatibility (HY) -3600 + (ID) 2000
Total energy: -93989.0 ( -55.88 by residue)
QMean score : 0.316
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