Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVTIEKIDEAIHRYYKQTHSVVSPDLIKAILYSVDGGGKRIRPRILLEILEGFGVELIDGHYDVAAALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDLVVKAGFK---ADVTVRLIELLSMSAGSFGMVGGQMLDMKGENKVLSIDDLSLIHINKTGRLLAYPFVAAGILAEKSE-EVKGKLHQAGLLIGHAFQVRDDILDVTASFEELGKTPNKDIVAEKTTYPNLLGLDKSQEILDDTLKKAQAIFQNLEKKANFNARKIIDIIEGLRLNG |
3LSN Chain:A ((11-281)) | ---QARVDAAMHTLF-TAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKP-EQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPALSDASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHKTGALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATL------------PTYPALLGLAAAKEYALELRDQALHALRPFDAAAEPLRELARYIVE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LSN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109548 for 2133 contacts (-51.4/contact) +
2D Compatibility (PS) -27220 + (NN) -10020 + (LL) 1420
1D Compatibility (HY) -13200 + (ID) 4750
Total energy: -163318.0 ( -76.57 by residue)
QMean score : 0.533
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