Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKY------LEDNYWYTAEPASDFYHKYPVDLALAEEYGVNGIRISIAWSRIFPTGYGEVNLKGVEFYHKLFEECHKRHVEPFVTLHHFDTPEALHSNGDFLNRDNIEHFVNYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPGIQYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPLDPENSADVRAAELEDIIHNKFILDATYLGYYSEMTMAGVKHILKENGGELDLREEDFQALEAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPKTDWDWIIYPQGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNTVYDDG-RIDYVKQHLEVLSEAISDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFETQERYPKKSAHWYKQ-VAKTQIIE |
| 1UG6 Chain:A ((6-429)) | ------EKFLWGVATSAYQIEGATQEDGRGPSIWDAFAQRPGAIRDGS--TGEPACDHYRRYEEDIALMQSLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLALEERGGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTGEHAPGLR-NLEAALRAAHHLLLGHGLAVEALRAAGAR-RVGIVLNFAPAYGEDPE------AVDVADRYHNRFFLDPILGKGYPESPF--------RDPPPVPILSRDLELV--ARPL-DFLGVNYYAPVRVAPGTGTLPV--------------------RYLPPEGPATAMGWEVYPEGLYHLLKRLGREVP--WPLYVTENGAAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWSLMDNFEWAFGYTRRFGLYYVDFPSQRRIPKRSALWYRERIARA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176649 for 3782 contacts (-46.7/contact) +
2D Compatibility (PS) -43981 + (NN) -14783 + (LL) 2680
1D Compatibility (HY) -31600 + (ID) 7650
Total energy: -271983.0 ( -71.92 by residue)
QMean score : 0.728
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