Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKHDIEKVLISEEEIQKKVKELGAELTSEYQD------TFPLA-IGVLKGALPFMADLIKHIDTY---LEMDFMDVSSYGNSTVSSGEVKIIKDLDTSVEGRDILIIEDIIDSGLTLSYLVELFRYRKAKSIKIVTLLDKPSGRKADIKADFVGFEVPDAFVVGYGLDYAERYRNLPYIGVLKPAVYES
1I13 Chain:A ((9-190))
------EKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGLTSSGQVRMLLDTRHSIEGHHVLIVEDIVATALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNAFVIGYGLDYDDTYRELRDIVVLRPEVY--
General information:
TITO was launched using:
RESULT:
Template:
1I13.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141452 for 1306 contacts (-108.3/contact) +
2D Compatibility (PS) -18664 + (NN) -5804 + (LL) 728
1D Compatibility (HY) -21600 + (ID) 3900
Total energy: -190692.0 ( -146.01 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_1I13.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I13-query.scw
PDB file :
Tito_Scwrl_1I13.pdb
: