Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------MKSRGLVRFFFSILAVG-----ALITSIVGFALK---WGEYRGLFLTFEAGQIFSVLFWFI------------GVGMIFSVISQM-GFFVFLTVHRFALEILRSSSLWNLLQLF-----FILFVAFDLMYVRFLFFGESGESLAGYAWLPVFLLIFGVITAY-----------IKQKQSSKKTFVSSLFLMVVITAL------------EWFPALR----VNDEDWLYLMLFPLMACNAFQLL-------------MLPKFAAK-- |
4XGC Chain:B ((62-352)) | EGSINAIMEEYRSYFPKWMCILNEGFNILLYGLGSKHQLLQSFHREVLHKQTVLVVNGFFPSLTIKDMLDSITSDILDAGISPANPHEAVDMIEEEFALIPETHLFLIVHNLDGAMLRNVKAQAILSRLARIPNIHLLASIDHINTPLLWDQGKLCSFNFSWWDCTTMLPYTNETAFENSLLVLALSSMRSVFSSLTTNSRGIYMLIVKYQLKNKGNATGMPFRDLYSSCREAFLVSSDLALRAQLTEFLDHKLVKSKRSSEQLTIPIDGALLQQFLEEQE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217145 for 1310 contacts (-165.8/contact) +
2D Compatibility (PS) -20301 + (NN) -177 + (LL) 0
1D Compatibility (HY) -10400 + (ID) 2000
Total energy: -250023.0 ( -190.86 by residue)
QMean score : 0.197
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