Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPKPNNQTTVVITGASSGIGVELARGLAGRGFPLMLVA-RRRERLDELADQLRQEHCVGVEVLPLDLADTQARAQLADRL--RSDAIAGLCNSAGFGTSGRFWELPFARESEEVVLNALALMELTHAALPGMVKRGAGAVLNIASIAGFQPIPYMAVYSATKAFVLTFSEAVQEELHGTGVSVTALCPGPVPTEWAEIASAERFSIPLAQVSPHDVAEAAIAGMLSGKRTVVPGIVPKFVSTSGRFAPRSLLLPAIRIGNRLRGGPSR
2ZTL Chain:A ((8-190))
------------VVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRT---------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZTL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122907 for 1448 contacts (-84.9/contact) +
2D Compatibility (PS) -19936 + (NN) -12835 + (LL) 5076
1D Compatibility (HY) -8000 + (ID) 2900
Total energy: -161502.0 ( -111.53 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_2ZTL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZTL-query.scw
PDB file :
Tito_Scwrl_2ZTL.pdb
: