Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGGTFDPIHYGHLVAASEVADLFDLDEVVFVPSGQPWQKGRQVSAAEHRYLMTVIATASN--P--RFSVSRVDIDRGGPTYTKDTLADLHALH-PDSELYFTTGADALASIMSWQGWEELFELARFVGVSRPGYELRNEH------IT------SLLGQLAKDALTLVEIPALAISSTDCRQRAEQSRP--------LWYLMPDGVVQYVSKCRLYCGACDAGARSTTSLAAGNGL
4WSO Chain:A ((55-270))
LGGTFDPIHDGHLALARRFADVLRLTELVLMPAGQPYQKQ-DVSAAEHRLAMTRAAAGSLVLPGVAVSVATDEIEHAGPTYTVETLERWRERLGADASLSLLIGADQLVRLDTWRDWRRLFDFAHVCAATRPGFDFAAASPAVAAEIASRQASADVLRATPAGRLLIDTTLALDVAATDIRAHLRACIARHAQVPDASAEHVSPAVWAYILQHRLYH-------------------
General information:
TITO was launched using:
RESULT:
Template:
4WSO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107013 for 1454 contacts (-73.6/contact) +
2D Compatibility (PS) -20439 + (NN) -7265 + (LL) 532
1D Compatibility (HY) -12400 + (ID) 3600
Total energy: -150185.0 ( -103.29 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_4WSO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WSO-query.scw
PDB file :
Tito_Scwrl_4WSO.pdb
: