Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNSTDGRADGRLRVVVLGSTGSIGTQALQVIADN---PDRFEVVGLAAGGAHLDTLLRQRAQTGVTNIAVAD----EHAAQRVGDIPYH------GSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANKESLVAGGSLV---LRAARPGQIVPVDSEHSALAQCLRGGTP-------------DEVAKLVLTASGGPFRGWSAADLEHVTPEQAGAHPTWSMGPMNTLNSASLVNKGLEVIETHLLFGIPYDRIDVVVHPQSIIHSMVTFIDGSTIAQASPPDMKLPISLALGWPRRVSGAAAACDFHTASSWEFEPLDTDVFPAVELARQAGVAGGCMTAVYNAANEEAAAAFLAGRIGFPAIVGIIADVLHAADQWAVEPATVD---DVLDAQRWARERAQRAVSGMASVAIASTAKPGAAGRHASTLERS |
| 3AU9 Chain:B ((78-478)) | ------------INVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKS-VNELYEQAREFLPEYLCIHDKSVYEELKELVKNIKDYKPIILCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAGFFLKKLLNIHKNAKIIPVDSEHSAIFQCLDNNKVLKTKCLQDNFSKINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLEVIETHFLFDVDYNDIEVIVHKECIIHSCVEFIDKSVISQMYYPDMQIPILYSLTWPDRIKTNLKPLDLAQVSTLTFHKPSLEHFPCIKLAYQAGIKGNFYPTVLNASNEIANNLFLNNKIKYFDISSIISQVLESFNSQKVSENSEDLMKQILQIHSWAKDKA------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AU9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213237 for 3182 contacts (-67.0/contact) +
2D Compatibility (PS) -39776 + (NN) -15563 + (LL) 2160
1D Compatibility (HY) -36000 + (ID) 6850
Total energy: -309266.0 ( -97.19 by residue)
QMean score : 0.456
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