Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLAIIAGDGIGPEVTAEAVKVLDAVVPGVQKTSYDLGA---RRFHATGEVLPDSVVAELRNHDAILLGAIGDPSVPSGVLERGLLLRLRFELDHHINLRPARLYPGVASPLSGNPGIDFVVVREGTEGPYTGNGGAIRVGTPNEVATEVSVNTAFGVRRVVADAFERARRR-RKHLTLVHKTNVLTFAGGLWLRTVDEVGECYPDVEVAYQHVDAATIHMITDPGRFDVIVTDNLFGDIITDLAAAVCGGIGLAASGNIDATRANPSMFEPVHGSAPDIAGQGIADPTAAIMSVALLLSHLGEHDAAARVDRAVEAHLATRGSERLATSDVGERIAAAL |
2D1C Chain:A ((22-335)) | --ITVIPGDGIGPECVEATLKVLEAAKAPLAYEVREAGASVFRRGIASG--VPQETIESIRKTRVVLKGPL---ETPVGYGEKSANVTLRKLFETYANVRPVREFPNVPTPYAGR-GIDLVVVRENVEDLY---AGIEHMQTPS-VAQTLKLISWKGSEKIVRFAFELARAEGRKKVHCATKSNIMKLAEGTLKRAFEQVAQEYPDIEAVHIIVDNAAHQLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANIGNEVA---IFEAVHGSAPKYAGKNVINPTAVLLSAVMMLRYLEEFATADLIENAL---LYTLEEGRVLTGDV-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176661 for 2690 contacts (-65.7/contact) +
2D Compatibility (PS) -34179 + (NN) -19821 + (LL) 832
1D Compatibility (HY) -20800 + (ID) 5850
Total energy: -256479.0 ( -95.35 by residue)
QMean score : 0.490
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