Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSTVAAYAAMSAT--EPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWN-AGANTRVAIIGLGGLGHMGVKLGAAMGADVTVLSQSLKKMEDG-LRLGAKSYYATADPDTFRKLRGGFDLILNTVSANLDLGQYLNLLDVDGTLVELGIPEHPMAVPAFALALMRRSLAGSNIGGIAETQEMLNFCAEHGVTPEIELIEPDYINDAYERVLASDVRYRFVIDISAL
1YQD Chain:A ((13-359))-HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILT-YASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKHNITADIEVISTDYLNTAMERLAKNDVRYRFVIDVGN-


General information:
TITO was launched using:
RESULT:

Template: 1YQD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -222873 for 3076 contacts (-72.5/contact) +
2D Compatibility (PS) -36740 + (NN) -14637 + (LL) 436
1D Compatibility (HY) -34000 + (ID) 7850
Total energy: -315664.0 ( -102.62 by residue)
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_1YQD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YQD-query.scw
PDB file : Tito_Scwrl_1YQD.pdb: