Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSLAERTVLVTGANRGMGREYVAQLLGRKVAKVYAATRNPLAIDVS---DPRVIPLQLDVTDAVSVAEAADLATDVGILINNAGISRASSVLDKDTSALRGELETNLFGPLALASAFADRIAE--RSGAIVNVSSVLAWLPLGM--SYGVSKAAMWSATESMRIELAPRGVQVVGVYVGLVDTDMGRFA--------------DA-PKSDPADVVRQVLDGIEAGKEDVLADEMSRQVRASLNVPARERIARLMGN
3D3W Chain:A ((3-226))
-LFLAGRRVLVTGAGKGIGRGTVQALHATGAR-VVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3D3W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111370 for 1685 contacts (-66.1/contact) +
2D Compatibility (PS) -21685 + (NN) -4444 + (LL) 2888
1D Compatibility (HY) -11600 + (ID) 2950
Total energy: -149161.0 ( -88.52 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_3D3W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D3W-query.scw
PDB file :
Tito_Scwrl_3D3W.pdb
: