Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAKSDFEMVEVARS
1T9O Chain:B ((2-53))
----KKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGGGKDQFEEVE----
General information:
TITO was launched using:
RESULT:
Template:
1T9O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14755 for 314 contacts (-47.0/contact) +
2D Compatibility (PS) -5498 + (NN) -4637 + (LL) 552
1D Compatibility (HY) -3200 + (ID) 1250
Total energy: -28788.0 ( -91.68 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_1T9O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T9O-query.scw
PDB file :
Tito_Scwrl_1T9O.pdb
: