Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPAPVQVMGVLNVTDDSFSDGGCYLD-LDDAVKHGLAMAA-----AGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ------GITVSIDTMRADVARAALQNGAQMVNDVSGGRADPAMGPLLAEA-DVPWVLMHWRAVSADTPHVPVRYG----------------------------NVVAEVRADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELVA----------------TGIPVLVGASRKRFLGALLAGPDGVMRPTDGRDTATAVISALAALHGAWGVRVHDVRASVDAIKVVEAWMGAERIERDG |
| 2BMB Chain:A ((223-543)) | ---SPTYIMAIFNATPDSFSDGGEHFADIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSIDTYRSNVAKEAIKVGVDIINDISGGLFDSNMFAVIAENPEICYILSHTRGDISTMN-RLAHYENFALGDSIQQEFVHNTDIQQLDDLKDKTVLIRNVGQEIGERYIKAIDNGVKRWQILIDPGLGFAKTWKQNLQIIRHIPILKNYSFTMNSNNSQVYVNLRNMPVLLGPSRKKFIGHITKD-----VDAKQRDFATGAVVASCIGFGSDMVRVHDVKNCSKSIKLADAIYKG------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128952 for 2238 contacts (-57.6/contact) +
2D Compatibility (PS) -29737 + (NN) -24725 + (LL) 460
1D Compatibility (HY) -18000 + (ID) 4350
Total energy: -205304.0 ( -91.74 by residue)
QMean score : 0.487
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