Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPGRWSAETRLALVRRARRMNRALAQAFPHVYCE-LDFTTPLELAVATILSAQSTDKRVNLTTPALFARYRTARDYAQADRTELESLIRPT--GFYRNKAASLIGLGQALVERFGG--------------EVPATMDKLVTLPGVGRKTANVILGNAFGIPGITVDTHFGRLVRRWRWTTAE-DPVKVEQAVGELIERKE--WTLLSHRVIFHGRRVCHARRPACGVCVLAKDCPSFGLGPTEPLLAAPLVQGPETDHLLALAGL
4UOB Chain:A ((37-265))
-------------PVWFGEYLSRLRDTYAPELPPPRQFPDPLGGLIRTILSQQNTRRVAQRQWEVLTATYPQWEAALLDGPDGIEATLKSAGGGLSRMKADYIYGILAHLQEHHGGLSLRFLREFPHTPEGHEQARQALAALPGVGHKTVALVLLFDLRRPAMPVDGNMERAAKRLELVPAAWNSHKVERWYAEVMPADWETRFALHISGVRHGRDTCRSKHPLCPQCPLREFCPSASIFEL-----------------------
General information:
TITO was launched using:
RESULT:
Template:
4UOB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128054 for 1577 contacts (-81.2/contact) +
2D Compatibility (PS) -22152 + (NN) -11059 + (LL) 2604
1D Compatibility (HY) -5600 + (ID) 2700
Total energy: -166961.0 ( -105.87 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_4UOB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UOB-query.scw
PDB file :
Tito_Scwrl_4UOB.pdb
: