Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNLLLSPLAVGNLALRNRIVMAPMTRSRAQQPGDVPTALNAL-YYAQRAGAGLIVSEGTQISHLGQGYAYTPGIYSEAQLAGWRQVTEAVHAAGGLIAAQLWHVGR--MSHRSLQ--AGGEAP-----IAPSPIQAKAQVFIADGQGGGSMAPADAPREMTLEDIRR-VRDEFVRAARNAL-DAGFDLVELHGANGYLIDQFLASASNRR-SDAYGG-SLENRARFLLEIVDALVAAVGAERVGLRLSPWGTINDMHDDEPEAMTLYLAEALQRRGIAYLHLAEWEWSGGPAYPQGFRER---LRERFRAPLIVCGNYDAERAEAILQAGLADAVAIGRPFIANPDLVERIRLGAPLAEANQARFYGGDAAGYTDYPTLGQSATA |
| 4E2B Chain:A ((10-381)) | ----LLRPLKLGRYTLRNRIIMAPLTRCQATEDGHVPRTESMLKYYEDRASAGLIIAEATMVQPNYTGFLTEPGIYSDAQIEEWRKIVDAVHKKGGLIFLQLIHAGRAGIPEKILQQPKSDQDPLAGRLLAASAIPIKDHRIPAYFAASGEKETYGVPEELTDDEVRNGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLH-----YLRGDMVNQQIGDVVAWVRGSYSGVKISNLRYDFEEADQQIREGKVDAVAFGAKFIANPDLVERAQHDWPLNEPRPETYYTRTAVGYNDYPTYN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207787 for 3139 contacts (-66.2/contact) +
2D Compatibility (PS) -38689 + (NN) -20020 + (LL) 1392
1D Compatibility (HY) -28000 + (ID) 7400
Total energy: -300504.0 ( -95.73 by residue)
QMean score : 0.477
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