Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYMS
3TZC Chain:A ((8-249))
MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITR----MRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVV------------AAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM-----DEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMY--
General information:
TITO was launched using:
RESULT:
Template:
3TZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151443 for 1860 contacts (-81.4/contact) +
2D Compatibility (PS) -23563 + (NN) -8737 + (LL) 1020
1D Compatibility (HY) -21200 + (ID) 7050
Total energy: -210973.0 ( -113.43 by residue)
QMean score : 0.638
(partial model without unconserved sides chains):
PDB file :
Tito_3TZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TZC-query.scw
PDB file :
Tito_Scwrl_3TZC.pdb
: